Protocols

The following protocols and standard operating procedures are used by our National Resource for top down proteomics research.

Protocol SOP_001. For Generating TD LC-MS Data on Protein Standards

This standard protocol details how to make a standard mix of proteins for tracking LC-MS performance and illustrates how to configure an instrument for high-quality data collection.





Protocol SOP_002. For Preparation of Human Whole Cell Lysate for Analysis by Qualitative TDMS.

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Protocol SOP_003.2 Internal User TDPortal Protocol.

Download Protocol SOP 003.0

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Protocol SOP_004.2 External User TDPortal Protocol.

Download Archived Protocol SOP_004.1

Download Archived Protocol SOP_004.0

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Protocol SOP_005. A Guide to Uploading to the Proteoform Repository.

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Protocol SOP_006. External User Transfer of Project Files to TDPortal.

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Protocol SOP_007. Minimum Information for Reporting Proteoforms.

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