As part of the dissemination goals of the national resource, we present the following software packages.
Complex Search Tool: A new search engine designed for hierarchical top-down analyses, identification, and scoring of whole protein complexes by native, tandem mass spectrometry is available on-line. An example of the type of results that can be used is available here. A description of this tool along with several use cases was recently published and can be found here.
External Software Libraries
As part of developing our applications, the NRTDP uses a handful of external libraries. We would like to thank the following companies for their generous academic, free-use licensing.